PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang08g05310.7
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 158aa    MW: 17626.3 Da    PI: 4.443
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang08g05310.7genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.32.5e-152451056
             AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +++g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g+
  Vang08g05310.7  2 RNWGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKGH 45
                    57**********843...6***********************99986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.981152IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.2E-27153IPR001471AP2/ERF domain
SMARTSM003803.4E-28158IPR001471AP2/ERF domain
CDDcd000186.39E-28154No hitNo description
SuperFamilySSF541713.01E-18253IPR016177DNA-binding domain
PfamPF008473.0E-10245IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MRNWGKWVSE IREPRKKSRI WLGTYPTAEM AARAHDVAAL AIKGHSAYLN FPELAQELPT  60
PASTSPKDIQ AAAAKAANTP FDVNHCQSTI EDEEREEEPR QTQNVSSSSS NSTNDDDTLF  120
DLPDLFPDEL CSYSSSWHLC AVGSGFRLEE SLFWENY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150420.0AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014516126.11e-95PREDICTED: ethylene-responsive transcription factor ERF034-like
SwissprotQ8LBQ75e-56ERF34_ARATH; Ethylene-responsive transcription factor ERF034
TrEMBLA0A0S3SVN31e-117A0A0S3SVN3_PHAAN; Uncharacterized protein
STRINGGLYMA07G14560.17e-73(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.16e-40ERF family protein